SysteMHC v.180409
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SysteMHC Atlas Statistics




Human Data Overview[1]


MHCClass Unique Samples Unique Proteins Unique Peptides Unique Alleles [2] Organism
I 238 14009 159065 66 Human
II 146 3902 40042 0 Human

Tissue Types

  • Blood
  • Breast
  • Colon
  • Brain
  • Bronchoalveolar lavage fluid
  • Synovium
  • Skin

Cell Types

  • B lymphoblast
  • PBMC
  • THP1
  • JY
  • Fibroblast
  • HCC1143
  • HCC1937
  • HCT116
  • SupB15-RT
  • SupB15-WT
  • HHC
  • U-87
  • T98G
  • LNT-229
  • CD4+ PBMC
  • Jurkat
  • C8166
  • HMy2-C1R
  • B lymphoblastoid cell line GR
  • MUTZ-3
  • Macrophage
  • Synovial fluid mononuclear cells
  • Melanoma

Isolation Types

  • Immunoaffinity
  • Mild acid elution

Antibody Types

  • W6/32
  • L243
  • SPV-L3 (anti-DQ)
  • 2.12.E11 (anti-DQ2)
  • HB-145

Disease Types

  • Sarcoidosis
  • Idiopatic pulmory fibrosis
  • Idiopathic interstitial pneumonia
  • Lyme arthritis
  • Rheumatoid arthritis
  • Metastatic

MS Instruments

  • Triple-TOF 5600
  • Orbitrap XL
  • Q-Exactive
  • LTQ-FT
  • Q-Exactive Plus
  • Orbitrap Elite
  • Orbitrap Velos
  • Orbitrap Fusion
  • Q-Exactive HF

[1] Peptides filtered at the 1%FDR at the sample level.

[2] Alleles to which identified peptides have been assigned to.